Replaces slow, custom parsing scripts for genomic files with high-performance Arrow and DuckDB integrations. It enables SQL-based querying and Polars-based processing of VCF, BAM, and GFF files directly in memory.
Tech Stack
RustAI, ML & Data
Why biobear?
• Extremely fast file I/O
• SQL support for bio-files
• Low memory footprint
Limitations
• Limited to specific file formats
• Newer project with evolving API
• Requires Rust/Python knowledge
2/13/2026
Last Update
13
Forks
16
Issues
MIT
License
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