DeeplyTough

The premium Open Source alternative to SiteHopper

🎯 Best for:Structural comparison and similarity search of protein pockets.

What is DeeplyTough?

Replaces commercial pocket matching tools like SiteHopper. It uses 3D convolutional neural networks to learn descriptors for protein pocket similarity.

Tech Stack
PythonBiology & Biotechnology

Why DeeplyTough?

  • Alignment-free
  • Fast comparison
  • 3D spatial awareness

Limitations

  • Requires GPU
  • Data preprocessing heavy
  • Specific to binding sites
11/13/2025
Last Update
40
Forks
13
Issues
Other
License
Financial Leak Detected

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Competitor Cost
-$1,440
/ year (est. based on SiteHopper)
Self-Hosted
$0
/ year
Team Size10 Users
150+
SAVE 100%

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