Replaces heavy bioinformatics suites with an optimized C implementation for FASTQ sequence prefix counting. It utilizes sequential memory mapping of ASCII-encoded files to verify multiplexed sample barcodes at high speeds.
Tech Stack
CBiology & Biotechnology
Why pfastqcount?
• High performance C implementation
• Low memory footprint
• Ruby portability option
Limitations
• Unix-only C version
• CLI only
• No GUI
3/13/2021
Last Update
1
Forks
0
Issues
MIT
License
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